# Generated by roxygen2: do not edit by hand

export(Monte_Carlo_StrathE2E)
export(Sensitivity_analysis_StrathE2E)
export(StrathE2E)
export(annealing_find_ecology_parameters)
export(annealing_find_gear_activity_mult_HR_target)
export(annealing_find_gear_activity_mult_ecosystem_target)
export(annealing_find_harvest_ratio_mult)
export(box_and_whisker_annual_plots)
export(box_and_whisker_annual_plots_with_credible_intervals)
export(box_and_whisker_monthly_plots)
export(box_and_whisker_monthly_plots_with_credible_intervals)
export(calculate_hr_scale_values)
export(compare_two_runs_aam)
export(compare_two_runs_catch)
export(concatenate_raw_sensitivity_analysis_results)
export(copy_model)
export(extract_new_initial_cond_from_end_of_run)
export(list_models)
export(plot_Monte_Carlo_parameter_distributions)
export(plot_final_year)
export(plot_final_year_HTL_inshore_vs_offshore)
export(plot_final_year_LTL_inshore_vs_offshore)
export(plot_final_year_migration_data_with_credible_intervals)
export(plot_final_year_time_series_data_with_credible_intervals)
export(plot_final_year_trophic_data_with_credible_intervals)
export(plot_for_each_gear_catch_by_guild)
export(plot_for_each_guild_catch_by_gear)
export(plot_full_length_timeseries)
export(plot_inshore_vs_offshore_anavmass_with_credible_intervals)
export(plot_sediment_habitats_final_year)
export(plot_sensitivity_analysis_results)
export(plot_time_series_annual_land_disc)
export(process_sensitivity_analysis_results_offline)
export(read_model)
importFrom(NetIndices,AscInd)
importFrom(NetIndices,EffInd)
importFrom(NetIndices,GenInd)
importFrom(NetIndices,PathInd)
importFrom(NetIndices,TrophInd)
importFrom(deSolve,ode)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,boxplot)
importFrom(graphics,bxp)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(methods,show)
importFrom(stats,approxfun)
importFrom(stats,quantile)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(utils,read.csv)
importFrom(utils,write.table)
useDynLib(StrathE2E2)
